← Environments

Chimera

Chimera

Chimera

A scientific analysis environment for sequencing quality and genetic association. Agents inspect data, execute analysis code, and support their conclusions with measured evidence.

A scientific analysis environment for sequencing quality and genetic association. Agents inspect data, execute analysis code, and support their conclusions with measured evidence.

Genetic association

Genetic association

Genetic association

Agents work with genotype tables, cohort records, and measured traits to identify an association and test whether it replicates. Hidden relationships between samples make independent validation a substantive part of the analysis.

Agents work with genotype tables, cohort records, and measured traits to identify an association and test whether it replicates. Hidden relationships between samples make independent validation a substantive part of the analysis.

Read the research →

Sequencing quality

Sequencing quality

Sequencing quality

The paired-end sequencing intake task asks an agent to inspect paired sequencing reads and reference data, then recommend proceed, review, or stop. The decision must be supported by quality measurements and reference classification.

The paired-end sequencing intake task asks an agent to inspect paired sequencing reads and reference data, then recommend proceed, review, or stop. The decision must be supported by quality measurements and reference classification.

Scientific conclusions

Scientific conclusions

Scientific conclusions

The task checks both intermediate quantities and the final conclusion: association strength, effect size, uncertainty, related-pair counts, and replication. Finding a plausible signal alone does not complete the assignment.

The task checks both intermediate quantities and the final conclusion: association strength, effect size, uncertainty, related-pair counts, and replication. Finding a plausible signal alone does not complete the assignment.

What the agent must produce

What the agent must produce

What the agent must produce

Sequencing tasks require a quality decision, measured evidence, and a methods record. Genetic association tasks require the lead variant, discovery evidence, holdout effect and uncertainty, a replication decision, and the count of hidden related pairs.

Sequencing tasks require a quality decision, measured evidence, and a methods record. Genetic association tasks require the lead variant, discovery evidence, holdout effect and uncertainty, a replication decision, and the count of hidden related pairs.